EnhancerDB
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  3. rs62048592[chr16:85171488]
Enhancers that have rs62048592[chr16:85171488]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85155669 85199515 enh16863
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs62048592[chr16:85171488]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85167902 85173252 ZNF143 GTRD no Epithelial (MCF-7) 21720117
chr16 85167902 85173252 ZNF143 GTRD no Epithelial (MCF-7) 108213348
chr16 85167907 85172163 TCF7L2 GTRD no Colon (HCT116) 108213349
chr16 85168302 85173255 TCF7L2 GTRD no Colon (HCT116) 108213350
chr16 85168376 85171973 TCF7L2 GTRD no Colon (HCT116) 108213352
chr16 85168428 85172197 TCF7L2 GTRD no Colon (HCT116) 108213354
chr16 85168442 85172303 TCF7L2 GTRD no Colon (HCT116) 108213355
chr16 85168580 85174322 ZNF274 GTRD no Bone Marrow (K562) 108213357
chr16 85168793 85172995 ZNF274 GTRD no Bone Marrow (K562) 108213365
chr16 85169126 85173192 ZNF274 GTRD no Liver (HepG2) 21720127
chr16 85169126 85173192 ZNF274 GTRD no Liver (HepG2) 108213373
chr16 85169135 85173333 ZNF274 GTRD no Bone Marrow (K562) 108213374
chr16 85169191 85172012 ZNF274 GTRD no Bone Marrow (K562) 108213376
chr16 85169296 85173225 ZNF143 GTRD no Epithelial (MCF-7) 21720130
chr16 85169296 85173225 ZNF143 GTRD no Epithelial (MCF-7) 108213380
chr16 85169331 85174983 ZNF143 GTRD no Epithelial (MCF-7) 21720131
chr16 85169331 85174983 ZNF143 GTRD no Epithelial (MCF-7) 108213381
chr16 85169348 85172174 TCF7L2 GTRD no Colon (HCT116) 108213382
chr16 85169371 85173163 ZNF274 GTRD no Liver (HepG2) 21720133
chr16 85169371 85173163 ZNF274 GTRD no Liver (HepG2) 108213386
chr16 85169384 85173229 ZNF274 GTRD no Bone Marrow (K562) 108213387
chr16 85169437 85173225 ZNF274 GTRD no Bone Marrow (K562) 108213389
chr16 85169499 85173158 ZNF274 GTRD no Bone Marrow (K562) 108213391
chr16 85169507 85176130 ZNF274 GTRD no Bone Marrow (K562) 108213392
chr16 85169531 85171610 TCF7L2 GTRD no Colon (HCT116) 108213394
chr16 85169533 85174853 ZNF274 GTRD no Liver (HepG2) 21720134
chr16 85169533 85174853 ZNF274 GTRD no Liver (HepG2) 108213395
chr16 85169759 85174918 ZNF274 GTRD no Bone Marrow (K562) 108213407
chr16 85170201 85175135 ZNF274 GTRD no Liver (HepG2) 21720148
chr16 85170303 85173247 ZNF143 GTRD no Epithelial (MCF-7) 21720152
chr16 85170352 85174989 ZNF274 GTRD no Liver (HepG2) 21720155
chr16 85170379 85171917 ZNF274 GTRD no Liver (HepG2) 21720158
chr16 85171016 85175091 ZNF143 GTRD no Epithelial (MCF-7) 21720181
chr16 85171137 85176063 ZNF143 GTRD no Epithelial (MCF-7) 21720196
chr16 85171159 85173049 ZNF274 GTRD no Liver (HepG2) 21720200
chr16 85171293 85175399 ZNF274 GTRD no Cervix (HeLa-S3) 21720204
chr16 85171304 85173205 ZNF143 GTRD no Epithelial (MCF-7) 21720205
chr16 85171406 85173417 ZNF143 GTRD no Epithelial (MCF-7) 21720206
chr16 85171469 85171490 IRF1 JASPAR yes 12023742
chr16 85171470 85171491 ZNF263 JASPAR yes 12023743
chr16 85171473 85171494 ZNF263 JASPAR yes 12023744
chr16 85171475 85174976 ZNF274 GTRD no Liver (HepG2) 21720207
chr16 85171477 85171498 ZNF263 JASPAR yes 12023745
chr16 85171480 85171501 ZNF263 JASPAR yes 12023746
Genes associated with rs62048592[chr16:85171488], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More