EnhancerDB
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  3. rs62049612[chr16:88306885]
Enhancers that have rs62049612[chr16:88306885]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88291992 88310485 enh16901
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs62049612[chr16:88306885]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88305715 88307909 AR GTRD no Prostate (PC-3) 21735780
chr16 88305755 88307888 ZBTB33 GTRD no Brain (SK-N-SH) 21735781
chr16 88306052 88308120 TEF1 GTRD no Bone (Osteoblast) 21735782
chr16 88306320 88307680 ZBTB33 GTRD no Brain (SK-N-SH) 21735785
chr16 88306512 88307794 ZBTB33 GTRD no Brain (SK-N-SH) 21735786
chr16 88306546 88307714 ZBTB33 GTRD no Brain (SK-N-SH) 21735787
chr16 88306548 88307833 ZBTB33 GTRD no Brain (SK-N-SH) 21735788
chr16 88306568 88307742 ZBTB33 GTRD no Brain (SK-N-SH) 21735789
chr16 88306587 88307801 ZBTB33 GTRD no Brain (SK-N-SH) 21735790
chr16 88306621 88307848 ZBTB33 GTRD no Brain (SK-N-SH) 21735791
chr16 88306627 88307717 ZBTB33 GTRD no Lung (A549) 21735792
chr16 88306634 88307705 ZBTB33 GTRD no Brain (SK-N-SH) 21735793
chr16 88306638 88307789 ZBTB33 GTRD no Brain (SK-N-SH) 21735794
chr16 88306650 88307791 ZBTB33 GTRD no Brain (SK-N-SH) 21735795
chr16 88306667 88307792 ZBTB33 GTRD no Brain (SK-N-SH) 21735796
chr16 88306696 88307664 ZBTB33 GTRD no Brain (SK-N-SH) 21735797
chr16 88306725 88307597 ZBTB33 GTRD no Brain (SK-N-SH) 21735798
chr16 88306733 88307765 ZBTB33 GTRD no Brain (SK-N-SH) 21735799
chr16 88306832 88307580 TCF7L2 GTRD no Colon (HCT116) 21735800
chr16 88306833 88307619 ZBTB33 GTRD no Brain (SK-N-SH) 21735801
chr16 88306847 88307437 ZBTB33 GTRD no Brain (SK-N-SH) 21735802
chr16 88306873 88306888 FOXP1 JASPAR yes 12272864
chr16 88306875 88307506 ZBTB33 GTRD no Brain (SK-N-SH) 21735803
chr16 88306876 88306887 FOXP2 JASPAR yes 12272866
chr16 88306877 88306885 FOXO3 JASPAR yes 12272867
Genes associated with rs62049612[chr16:88306885], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More