EnhancerDB
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  3. rs62050400[chr16:85484388]
Enhancers that have rs62050400[chr16:85484388]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85477350 85511195 enh16870
Bone Marrow (K562) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs62050400[chr16:85484388]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85483188 85484392 ZNF143 GTRD no Epithelial (MCF-7) 21726076
chr16 85484248 85484916 ZNF274 GTRD no Bone Marrow (K562) 21726081
chr16 85484274 85484515 ZNF274 GTRD no Bone Marrow (K562) 21726082
chr16 85484364 85484629 ZNF274 GTRD no Bone Marrow (K562) 21726083
chr16 85484388 85484392 LFA1 TRANSFAC yes 12062727
Genes associated with rs62050400[chr16:85484388], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More