EnhancerDB
  1. Home
  2. SNP
  3. rs62052828[chr16:69624689]
Enhancers that have rs62052828[chr16:69624689]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 69621505 69657015 enh4116
Brain (SK-N-MC) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Lung (A549) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs62052828[chr16:69624689]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 69624676 69624689 NFKB1 JASPAR yes 11283612
chr16 69624676 69624689 NFKB2 JASPAR yes 11283613
chr16 69624681 69624692 E2F4 JASPAR yes 11283618
chr16 69624683 69624693 SP1 JASPAR yes 11283619
chr16 69624684 69624690 SP1 TRANSFAC yes 11283620
chr16 69624684 69624694 SP1 JASPAR yes 11283621
chr16 69624685 69624692 SP1 TRANSFAC yes 11283622
chr16 69624686 69624691 SP1 TRANSFAC yes 11283623
chr16 69624686 69624692 SP1 TRANSFAC yes 11283624
Genes associated with rs62052828[chr16:69624689], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More