EnhancerDB
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  3. rs62058154[chr17:55740965]
Enhancers that have rs62058154[chr17:55740965]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55736279 55747115 enh4495
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs62058154[chr17:55740965]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55740336 55741126 ZNF274 GTRD no Bone Marrow (K562) 21773676
chr17 55740336 55741126 ZNF274 GTRD no Bone Marrow (K562) 108274301
chr17 55740341 55741151 ZNF274 GTRD no Bone Marrow (K562) 21773677
chr17 55740341 55741151 ZNF274 GTRD no Bone Marrow (K562) 108274302
chr17 55740370 55740971 ZNF274 GTRD no Bone Marrow (K562) 21773681
chr17 55740370 55740971 ZNF274 GTRD no Bone Marrow (K562) 108274306
chr17 55740387 55741016 ZNF274 GTRD no Bone Marrow (K562) 21773682
chr17 55740387 55741016 ZNF274 GTRD no Bone Marrow (K562) 108274311
chr17 55740393 55741242 ZNF274 GTRD no Bone Marrow (K562) 21773683
chr17 55740393 55741242 ZNF274 GTRD no Bone Marrow (K562) 108274312
chr17 55740417 55740972 ZNF274 GTRD no Bone Marrow (K562) 21773685
chr17 55740417 55740972 ZNF274 GTRD no Bone Marrow (K562) 108274315
chr17 55740435 55740980 ZNF274 GTRD no Bone Marrow (K562) 21773687
chr17 55740435 55740980 ZNF274 GTRD no Bone Marrow (K562) 108274317
chr17 55740959 55740970 E2F1 JASPAR yes 54980924
Genes associated with rs62058154[chr17:55740965], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More