EnhancerDB
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  3. rs62078070[chr17:80466833]
Enhancers that have rs62078070[chr17:80466833]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80448407 80467804 enh4648
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs62078070[chr17:80466833]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80465637 80466835 ZNF143 GTRD no Epithelial (MCF-7) 21800708
chr17 80465648 80466877 ZNF143 GTRD no Epithelial (MCF-7) 21800710
chr17 80466185 80466900 TCF7L2 GTRD no Colon (HCT116) 21800713
chr17 80466220 80466881 ZNF143 GTRD no Epithelial (MCF-7) 21800715
chr17 80466235 80466903 TCF7L2 GTRD no Colon (HCT116) 21800716
chr17 80466540 80466887 TCF7L2 GTRD no Colon (HCT116) 21800719
chr17 80466566 80469395 ZNF274 GTRD no Bone Marrow (K562) 21800720
chr17 80466815 80466835 RREB1 JASPAR yes 56369494
chr17 80466816 80466836 RREB1 JASPAR yes 56369496
chr17 80466818 80466838 RREB1 JASPAR yes 56369497
chr17 80466821 80466841 RREB1 JASPAR yes 56369498
chr17 80466824 80466844 RREB1 JASPAR yes 56369499
chr17 80466827 80466847 RREB1 JASPAR yes 56369500
chr17 80466829 80466849 RREB1 JASPAR yes 56369501
chr17 80466831 80466846 FOXP1 JASPAR yes 56369502
chr17 80466831 80466852 IRF1 JASPAR yes 56369503
chr17 80466832 80466853 IRF1 JASPAR yes 56369504
chr17 80466833 80466853 RREB1 JASPAR yes 56369505
Genes associated with rs62078070[chr17:80466833], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More