EnhancerDB
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  3. rs62080980[chr17:80462616]
Enhancers that have rs62080980[chr17:80462616]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80448407 80467804 enh4648
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs62080980[chr17:80462616]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80461211 80462987 TCF7L2 GTRD no Colon (HCT116) 21800692
chr17 80462612 80462622 RORA JASPAR yes 56368755
chr17 80462613 80462624 ESRRA JASPAR yes 56368756
chr17 80462613 80462624 ESRRB JASPAR yes 56368757
chr17 80462613 80462626 NR2F1 JASPAR yes 56368758
chr17 80462615 80462623 NR4A2 JASPAR yes 56368759
chr17 80462615 80462633 RARA JASPAR yes 56368760
Genes associated with rs62080980[chr17:80462616], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More