EnhancerDB
  1. Home
  2. SNP
  3. rs62109902[chr19:13166480]
Enhancers that have rs62109902[chr19:13166480]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13160145 13191995 enh17930
Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
chr19 13163511 13167355 vista791
VISTA
Transcript factors that have rs62109902[chr19:13166480]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13166102 13167012 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107690440
chr19 13166102 13167012 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108388442
chr19 13166402 13168435 ZNF274 GTRD no Cervix (HeLa-S3) 107690441
chr19 13166402 13168435 ZNF274 GTRD no Cervix (HeLa-S3) 108388443
chr19 13166418 13170584 TCF7L2 GTRD no Colon (HCT116) 21850576
chr19 13166418 13170584 TCF7L2 GTRD no Colon (HCT116) 107690442
chr19 13166418 13170584 TCF7L2 GTRD no Colon (HCT116) 108388444
chr19 13166473 13166492 REST JASPAR yes 108572213
chr19 13166473 13166492 REST JASPAR yes 112505754
chr19 13166474 13168499 ZBTB33 GTRD no Lung (A549) 107690443
chr19 13166474 13168499 ZBTB33 GTRD no Lung (A549) 108388445
chr19 13166478 13166489 TFAP2A JASPAR yes 108572214
chr19 13166478 13166489 TFAP2A JASPAR yes 112505755
chr19 13166478 13166490 TFAP2A JASPAR yes 108572215
chr19 13166478 13166490 TFAP2A JASPAR yes 112505756
chr19 13166479 13166488 TFAP2A JASPAR yes 108572216
chr19 13166479 13166488 TFAP2A JASPAR yes 112505757
Genes associated with rs62109902[chr19:13166480], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More