EnhancerDB
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  3. rs62112547[chr19:4972478]
Enhancers that have rs62112547[chr19:4972478]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4966316 4995955 enh4974
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs62112547[chr19:4972478]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4969752 4972866 ZNF274 GTRD no Blood (GM12878) 108373950
chr19 4971025 4973751 TCF7L2 GTRD no Colon (HCT116) 21842892
chr19 4971025 4973751 TCF7L2 GTRD no Colon (HCT116) 108374026
chr19 4972474 4972489 NR2C2 JASPAR yes 112200593
Genes associated with rs62112547[chr19:4972478], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 4969125 5153606 + KDM4B ENSG00000127663.10 4969125 0 Esophagus 0.180929 16856