EnhancerDB
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  3. rs62128028[chr19:3345188]
Enhancers that have rs62128028[chr19:3345188]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3331365 3352459 enh17861
Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs62128028[chr19:3345188]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3343370 3345567 ZNF274 GTRD no Cervix (HeLa-S3) 21838737
chr19 3343370 3345567 ZNF274 GTRD no Cervix (HeLa-S3) 108365491
chr19 3343589 3345870 TCF7L2 GTRD no Colon (HCT116) 21838749
chr19 3343589 3345870 TCF7L2 GTRD no Colon (HCT116) 108365537
chr19 3343665 3345784 TCF7L2 GTRD no Colon (HCT116) 21838755
chr19 3343665 3345784 TCF7L2 GTRD no Colon (HCT116) 108365563
chr19 3344021 3345635 ZNF274 GTRD no Bone Marrow (K562) 108365610
chr19 3344632 3345625 TCF7L2 GTRD no Colon (HCT116) 21838785
chr19 3344644 3345854 TCF7L2 GTRD no Colon (HCT116) 21838786
chr19 3344671 3345201 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21838787
chr19 3344742 3345258 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21838788
chr19 3344815 3345718 TCF7L2 GTRD no Colon (HCT116) 21838789
chr19 3344822 3345772 TCF7L2 GTRD no Colon (HCT116) 21838790
chr19 3345181 3345188 SP1 TRANSFAC yes 112121881
chr19 3345181 3345202 ZNF263 JASPAR yes 112121882
chr19 3345184 3345194 ETV1 JASPAR yes 112121883
chr19 3345184 3345194 ETV4 JASPAR yes 112121884
chr19 3345184 3345194 ETV5 JASPAR yes 112121885
chr19 3345187 3345201 GLIS2 JASPAR yes 112121886
chr19 3345187 3345208 ZNF263 JASPAR yes 112121887
chr19 3345188 3345209 ZNF263 JASPAR yes 112121888
Genes associated with rs62128028[chr19:3345188], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More