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- rs622871[chr6:31878495]
Enhancers that have rs622871[chr6:31878495]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr6 |
31872005 |
31886495 |
enh23153 |
|
|
Transcript factors that have rs622871[chr6:31878495]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr6
|
31878490
|
31878498
|
TBX5
|
JASPAR
|
yes
|
|
101098252
|
|
|
chr6
|
31878490
|
31878499
|
ZEB1
|
JASPAR
|
yes
|
|
101098253
|
|
|
chr6
|
31878490
|
31878503
|
ZBTB18
|
JASPAR
|
yes
|
|
101098254
|
|
|
chr6
|
31878491
|
31878501
|
FIGLA
|
JASPAR
|
yes
|
|
101098255
|
|
|
chr6
|
31878491
|
31878501
|
ID4
|
JASPAR
|
yes
|
|
101098256
|
|
|
chr6
|
31878491
|
31878501
|
TCF3
|
JASPAR
|
yes
|
|
101098257
|
|
|
chr6
|
31878491
|
31878501
|
TCF4
|
JASPAR
|
yes
|
|
101098258
|
|
|
chr6
|
31878492
|
31878501
|
SNAI2
|
JASPAR
|
yes
|
|
101098259
|
|
|
chr6
|
31878493
|
31878498
|
USF2
|
TRANSFAC
|
yes
|
|
101098260
|
|
Genes associated with rs622871[chr6:31878495], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr6
|
31707725
|
31732622
|
+
|
MSH5
|
ENSG00000204410.10
|
31707725
|
145873
|
Thyroid
|
2.97473e-05
|
6402
|
|