EnhancerDB
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Enhancers that have rs623080[chr11:68140339]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 68134683 68153777 enh1858
Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr11 68140094 68140551 vista10710
VISTA
Transcript factors that have rs623080[chr11:68140339]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 68140176 68140476 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21498367
chr11 68140176 68140476 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107984793
chr11 68140193 68140483 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21498368
chr11 68140193 68140483 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107984794
chr11 68140329 68140340 TFAP2A JASPAR yes 39466917
chr11 68140329 68140340 TFAP2B JASPAR yes 39466918
chr11 68140329 68140340 TFAP2C JASPAR yes 39466919
chr11 68140329 68140340 TFAP2A JASPAR yes 114092345
chr11 68140329 68140340 TFAP2B JASPAR yes 114092346
chr11 68140329 68140340 TFAP2C JASPAR yes 114092347
Genes associated with rs623080[chr11:68140339], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More