EnhancerDB
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  3. rs62402160[chr6:36391135]
Enhancers that have rs62402160[chr6:36391135]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 36380365 36393498 enh55725
Skin (Keratinocyte) Cervix (HeLa-S3) Large Intestine Bone (Osteoblast) Lung (PC-9) Pancreas (Panc1) Uterus
chr6 36391024 36391283 vista51747
VISTA
Transcript factors that have rs62402160[chr6:36391135]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 36390747 36391703 E2F1 UCSC Txn Factor no Conserved 108539898
chr6 36390860 36391747 POLR2A UCSC Txn Factor no Conserved 108539899
chr6 36390883 36391259 CTCF UCSC Txn Factor no Conserved 108539900
chr6 36390930 36391230 SMC3 UCSC Txn Factor no Conserved 108539901
chr6 36390951 36391222 RAD21 UCSC Txn Factor no Conserved 108539902
chr6 36390975 36391431 E2F4 UCSC Txn Factor no Conserved 108539903
chr6 36390975 36391485 E2F6 UCSC Txn Factor no Conserved 108539904
chr6 36390977 36391448 MAX UCSC Txn Factor no Conserved 108539905
chr6 36390994 36391310 RUNX3 UCSC Txn Factor no Conserved 108539906
chr6 36391028 36391765 TFAP2A UCSC Txn Factor no Conserved 108539907
chr6 36391055 36391361 USF1 UCSC Txn Factor no Conserved 108539908
chr6 36391091 36391370 USF2 UCSC Txn Factor no Conserved 108539909
chr6 36391132 36391145 SCRT2 JASPAR yes 70354390
chr6 36391132 36391145 SCRT2 JASPAR yes 101337656
Genes associated with rs62402160[chr6:36391135], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More