EnhancerDB
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  3. rs62405458[chr5:180225919]
Enhancers that have rs62405458[chr5:180225919]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 180224280 180229573 enh22884
Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Peripheral Blood (MM.1S) Blood (T-cell) Heart
Transcript factors that have rs62405458[chr5:180225919]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 180225900 180225921 IRF1 JASPAR yes 68223554
chr5 180225904 180225919 STAT2 JASPAR yes 68223558
chr5 180225917 180225923 SOX10 JASPAR yes 68223559
Genes associated with rs62405458[chr5:180225919], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More