EnhancerDB
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  3. rs62406230[chr5:179245856]
Enhancers that have rs62406230[chr5:179245856]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 179241645 179258975 enh22874
Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Stomach
Transcript factors that have rs62406230[chr5:179245856]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 179245853 179245866 TFAP2A JASPAR yes 68190442
chr5 179245853 179245866 TFAP2B JASPAR yes 68190443
chr5 179245853 179245866 TFAP2C JASPAR yes 68190444
chr5 179245853 179245868 TFAP2C JASPAR yes 68190445
chr5 179245854 179245865 EBF1 JASPAR yes 68190446
Genes associated with rs62406230[chr5:179245856], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More