EnhancerDB
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  3. rs62407761[chr5:180227628]
Enhancers that have rs62407761[chr5:180227628]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 180224280 180229573 enh22884
Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Peripheral Blood (MM.1S) Blood (T-cell) Heart
Transcript factors that have rs62407761[chr5:180227628]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 180227614 180227629 PRDM1 JASPAR yes 68223793
chr5 180227615 180227630 NR2C2 JASPAR yes 68223794
chr5 180227616 180227630 RXRB JASPAR yes 68223795
chr5 180227616 180227630 RXRG JASPAR yes 68223796
chr5 180227626 180227637 ETV2 JASPAR yes 68223797
chr5 180227626 180227637 SPDEF JASPAR yes 68223798
chr5 180227628 180227633 GATA2 JASPAR yes 68223799
Genes associated with rs62407761[chr5:180227628], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More