EnhancerDB
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  3. rs625436[chr1:201561675]
Enhancers that have rs625436[chr1:201561675]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201559168 201580562 enh12524
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs625436[chr1:201561675]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201561094 201563864 ZBTB33 GTRD no Brain (SK-N-SH) 21365074
chr1 201561469 201563577 ZBTB33 GTRD no Brain (SK-N-SH) 21365076
chr1 201561609 201563495 ZBTB33 GTRD no Brain (SK-N-SH) 21365077
chr1 201561610 201561936 ZNF143 GTRD no Epithelial (MCF-7) 21365078
chr1 201561661 201561676 HNF4A JASPAR yes 34510739
chr1 201561662 201561677 HNF4G JASPAR yes 34510740
chr1 201561671 201561680 NKX3-2 JASPAR yes 34510741
Genes associated with rs625436[chr1:201561675], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More