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- rs628988[chr11:1864564]
Enhancers that have rs628988[chr11:1864564]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr11 |
1860983 |
1869035 |
enh13685 |
|
|
Transcript factors that have rs628988[chr11:1864564]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr11
|
1862470
|
1865540
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107952017
|
|
|
chr11
|
1862470
|
1865540
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107952018
|
|
|
chr11
|
1862494
|
1864608
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107952020
|
|
|
chr11
|
1862582
|
1865287
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107952023
|
|
|
chr11
|
1862699
|
1865393
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107952025
|
|
|
chr11
|
1862823
|
1865660
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107952033
|
|
|
chr11
|
1862823
|
1865660
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107952034
|
|
|
chr11
|
1863148
|
1865595
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107952048
|
|
|
chr11
|
1863148
|
1865595
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107952049
|
|
|
chr11
|
1863179
|
1864688
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107952051
|
|
|
chr11
|
1863927
|
1864644
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107952082
|
|
|
chr11
|
1864550
|
1864564
|
TLX1
|
JASPAR
|
yes
|
|
36972669
|
|
|
chr11
|
1864551
|
1864565
|
TLX1
|
JASPAR
|
yes
|
|
36972670
|
|
|
chr11
|
1864564
|
1864575
|
NRF1
|
JASPAR
|
yes
|
|
36972671
|
|
Genes associated with rs628988[chr11:1864564], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr11
|
1848709
|
1858751
|
+
|
SYT8
|
ENSG00000149043.12
|
1848709
|
5813
|
Esophagus
|
0.00078399
|
10402
|
|