EnhancerDB
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  3. rs6426539[chr1:226977011]
Enhancers that have rs6426539[chr1:226977011]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226964222 226979005 enh27587
Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Stomach
Transcript factors that have rs6426539[chr1:226977011]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226976579 226977175 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387376
chr1 226976583 226977103 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387377
chr1 226976706 226977090 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387378
chr1 226976822 226977012 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387382
chr1 226977011 226977025 NR2F1 JASPAR yes 35844420
Genes associated with rs6426539[chr1:226977011], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More