EnhancerDB
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  3. rs6426769[chr1:23163405]
Enhancers that have rs6426769[chr1:23163405]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23150145 23164575 enh122
Skin (Keratinocyte) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Brain (SK-N-SH) Lung (A549) Placenta Colon (HCT116) Breast Thyroid Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Heart
Transcript factors that have rs6426769[chr1:23163405]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23163393 23163406 SMAD2 JASPAR yes 27397051
chr1 23163405 23163414 TFAP2A JASPAR yes 27397052
Genes associated with rs6426769[chr1:23163405], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More