EnhancerDB
A web database to discover the regulate relationships in the context of enhancers
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SNP
rs6429640[chr1:44232171]
Enhancers that have
rs6429640[chr1:44232171]
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Chrom.
Start
End
Enhancer ID
Tissues that enhancer appears
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chr1
44221165
44237481
enh300
View all 14 tissues
Skin (Keratinocyte)
Liver (HepG2)
Brain (SK-N-MC)
Prostate (RWPE1)
Lung (PC-9)
Esophagus
Blood (GM12878)
Muscle (A673)
Thyroid
Blood (Karpas-422)
Embryonic Stem Cell Line (H1-hESC)
Pancreas (Panc1)
Neural Stem Cells (H9)
Epithelial (MCF-7)
chr1
44232152
44232509
vista1418
View all 1 tissues
VISTA
Transcript factors that have
rs6429640[chr1:44232171]
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Chrom.
Start
End
TF name
Source
Predicted site?
Tissue
id
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chr1
44231729
44232249
ZNF143
ENCODE Uniform TFBS
no
Embryonic Stem Cell Line (H1-hESC)
107803035
chr1
44232171
44232191
TP63
JASPAR
yes
28516562
chr1
44232171
44232191
TP63
JASPAR
yes
118283340
Genes associated with
rs6429640[chr1:44232171]
, comfirmed by eQTL
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TSI
Blank TSI value indicates lack of sufficient expression for calculation
Chrom.
Start
End
Strand
Gene name
Ensembl ID
TSS of gene
Distance between TSS and SNP
Tissue
q Value
id
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