EnhancerDB
  1. Home
  2. SNP
  3. rs6458229[chr6:12376259]
Enhancers that have rs6458229[chr6:12376259]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12361863 12377975 enh55637
Prostate (PC-3) Liver (HepG2) Large Intestine Liver Blood (GM12878) Stomach Peripheral Blood (MM.1S) Pancreas (Panc1) Pancreas Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs6458229[chr6:12376259]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12376254 12376264 HOXA13 JASPAR yes 99968381
chr6 12376254 12376264 HOXB13 JASPAR yes 99968382
chr6 12376254 12376264 HOXD13 JASPAR yes 99968383
chr6 12376254 12376265 HOXA10 JASPAR yes 99968384
chr6 12376255 12376264 CDX1 JASPAR yes 99968385
chr6 12376255 12376266 CDX2 JASPAR yes 99968386
Genes associated with rs6458229[chr6:12376259], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More