EnhancerDB
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  3. rs6458252[chr6:41946261]
Enhancers that have rs6458252[chr6:41946261]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41927525 41949869 enh23245
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Astrocyte Blood (OCI-LY7) Stomach Placenta Adrenal Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs6458252[chr6:41946261]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41946250 41946271 IRF1 JASPAR yes 101683653
chr6 41946252 41946267 IRF9 JASPAR yes 101683654
chr6 41946253 41946267 IRF7 JASPAR yes 101683655
chr6 41946253 41946267 IRF8 JASPAR yes 101683656
chr6 41946254 41946268 STAT1 JASPAR yes 101683657
chr6 41946254 41946269 STAT2 JASPAR yes 101683658
chr6 41946254 41946272 IRF2 JASPAR yes 101683659
chr6 41946255 41946267 IRF1 JASPAR yes 101683660
Genes associated with rs6458252[chr6:41946261], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More