EnhancerDB
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  3. rs6482453[chr10:25190865]
Enhancers that have rs6482453[chr10:25190865]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 25169345 25193458 enh13071
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
chr10 25190845 25191315 vista6828
VISTA
Transcript factors that have rs6482453[chr10:25190865]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 25190611 25191135 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21422395
chr10 25190611 25191135 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107904426
chr10 25190696 25191100 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21422396
chr10 25190696 25191100 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107904427
chr10 25190713 25191149 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21422397
chr10 25190713 25191149 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107904428
chr10 25190718 25191308 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21422398
chr10 25190718 25191308 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107904429
chr10 25190765 25191269 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21422399
chr10 25190765 25191269 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107904430
chr10 25190768 25191012 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21422400
chr10 25190768 25191012 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107904431
chr10 25190803 25191173 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21422401
chr10 25190803 25191173 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107904432
chr10 25190833 25191373 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107904433
chr10 25190853 25190866 SCRT2 JASPAR yes 21061681
chr10 25190853 25190866 SCRT2 JASPAR yes 126103293
chr10 25190853 25190868 SCRT1 JASPAR yes 21061682
chr10 25190853 25190868 SCRT1 JASPAR yes 126103294
chr10 25190858 25191342 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107904434
chr10 25190863 25190868 GATA2 JASPAR yes 21061683
chr10 25190863 25190868 GATA2 JASPAR yes 126103295
chr10 25190864 25190870 ZNF354C JASPAR yes 21061684
chr10 25190864 25190870 ZNF354C JASPAR yes 126103296
Genes associated with rs6482453[chr10:25190865], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More