EnhancerDB
  1. Home
  2. SNP
  3. rs6490176[chr12:118771712]
Enhancers that have rs6490176[chr12:118771712]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 118762905 118786895 enh2629
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Astrocyte Blood (OCI-LY7) Lung (A549) Blood (GM12878) Muscle (A673) Thyroid Blood (Karpas-422) Spleen Stomach
Transcript factors that have rs6490176[chr12:118771712]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 118771700 118771714 PLAG1 JASPAR yes 124098085
chr12 118771707 118771712 SP1 TRANSFAC yes 124098086
chr12 118771708 118771713 SP1 TRANSFAC yes 124098087
chr12 118771708 118771717 THAP1 JASPAR yes 124098088
chr12 118771711 118771715 LFA1 TRANSFAC yes 124098089
Genes associated with rs6490176[chr12:118771712], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More