EnhancerDB
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  3. rs6490216[chr12:112019603]
Enhancers that have rs6490216[chr12:112019603]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 112004625 112027035 enh14993
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs6490216[chr12:112019603]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 112017928 112020694 AR GTRD no Prostate (PC-3) 21573774
chr12 112017928 112020694 AR GTRD no Prostate (PC-3) 108059826
chr12 112018051 112025115 ZBTB33 GTRD no Lung (A549) 21573775
chr12 112018051 112025115 ZBTB33 GTRD no Lung (A549) 108059827
chr12 112018456 112019619 ZNF274 GTRD no Blood (GM12878) 108059830
chr12 112018821 112019664 TCF7L2 GTRD no Colon (HCT116) 21573784
chr12 112018821 112019664 TCF7L2 GTRD no Colon (HCT116) 108059841
chr12 112018838 112020124 ZNF274 GTRD no Blood (GM12878) 108059842
chr12 112018995 112020052 ZNF274 GTRD no Cervix (HeLa-S3) 21573787
chr12 112018995 112020052 ZNF274 GTRD no Cervix (HeLa-S3) 108059846
chr12 112019593 112019607 RORA JASPAR yes 123756990
Genes associated with rs6490216[chr12:112019603], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More