EnhancerDB
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  3. rs6501543[chr17:70430643]
Enhancers that have rs6501543[chr17:70430643]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs6501543[chr17:70430643]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70430639 70430648 SRY JASPAR yes 55788157
chr17 70430641 70430656 MEF2C JASPAR yes 55788158
chr17 70430642 70430654 POU2F1 JASPAR yes 55788159
chr17 70430642 70430655 POU3F3 JASPAR yes 55788160
chr17 70430642 70430656 POU1F1 JASPAR yes 55788161
chr17 70430643 70430655 POU3F1 JASPAR yes 55788162
chr17 70430643 70430655 POU3F2 JASPAR yes 55788163
Genes associated with rs6501543[chr17:70430643], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More