EnhancerDB
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  3. rs6535444[chr4:84138840]
Enhancers that have rs6535444[chr4:84138840]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 84126925 84145939 enh8045
Skin (Keratinocyte) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Lung (PC-9) Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Thymus Stomach
chr4 84138724 84139183 vista45249
VISTA
Transcript factors that have rs6535444[chr4:84138840]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 84138732 84139291 EBF1 UCSC Txn Factor no Conserved 108532997
chr4 84138819 84139227 ATF2 UCSC Txn Factor no Conserved 108532998
chr4 84138822 84139218 RUNX3 UCSC Txn Factor no Conserved 108532999
chr4 84138831 84138845 ZIC1 JASPAR yes 49251656
chr4 84138831 84138845 ZIC1 JASPAR yes 90897132
chr4 84138831 84138846 ZIC3 JASPAR yes 49251657
chr4 84138831 84138846 ZIC4 JASPAR yes 49251658
chr4 84138831 84138846 ZIC3 JASPAR yes 90897133
chr4 84138831 84138846 ZIC4 JASPAR yes 90897134
Genes associated with rs6535444[chr4:84138840], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More