EnhancerDB
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  3. rs6538610[chr12:95559109]
Enhancers that have rs6538610[chr12:95559109]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 95555365 95565496 enh29883
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Colon (HCT116) Muscle (Myotube) Uterus
Transcript factors that have rs6538610[chr12:95559109]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 95559094 95559115 IRF1 JASPAR yes 122971537
chr12 95559096 95559111 PRDM1 JASPAR yes 122971538
chr12 95559098 95559119 IRF1 JASPAR yes 122971539
chr12 95559099 95559114 FOXP1 JASPAR yes 122971540
chr12 95559100 95559121 IRF1 JASPAR yes 122971541
chr12 95559101 95559116 FOXP1 JASPAR yes 122971542
chr12 95559101 95559122 IRF1 JASPAR yes 122971543
chr12 95559102 95559117 FOXP1 JASPAR yes 122971544
chr12 95559102 95559123 IRF1 JASPAR yes 122971545
chr12 95559106 95559127 IRF1 JASPAR yes 122971546
chr12 95559107 95559122 FOXP1 JASPAR yes 122971547
chr12 95559109 95559124 FOXP1 JASPAR yes 122971548
Genes associated with rs6538610[chr12:95559109], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More