EnhancerDB
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  3. rs6540086[chr16:87853820]
Enhancers that have rs6540086[chr16:87853820]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87852114 87863055 enh4181
Skin (Keratinocyte) Esophagus Muscle (A673) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Neural Stem Cells (H9) Thymus
Transcript factors that have rs6540086[chr16:87853820]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220354
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220355
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220356
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220357
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220358
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220359
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220360
chr16 87821323 87862287 ZBTB33 GTRD no Lung (A549) 108220361
chr16 87821323 87862287 ZBTB33 GTRD no Lung (A549) 108220362
chr16 87821323 87862287 ZBTB33 GTRD no Lung (A549) 108220363
chr16 87821323 87862287 ZBTB33 GTRD no Lung (A549) 108220364
chr16 87821323 87862287 ZBTB33 GTRD no Lung (A549) 108220365
chr16 87821323 87862287 ZBTB33 GTRD no Lung (A549) 108220366
chr16 87821323 87862287 ZBTB33 GTRD no Lung (A549) 108220367
chr16 87826277 87864042 ZBTB33 GTRD no Lung (A549) 108220537
chr16 87826277 87864042 ZBTB33 GTRD no Lung (A549) 108220538
chr16 87826277 87864042 ZBTB33 GTRD no Lung (A549) 108220539
chr16 87826277 87864042 ZBTB33 GTRD no Lung (A549) 108220540
chr16 87826277 87864042 ZBTB33 GTRD no Lung (A549) 108220541
chr16 87833991 87862182 ZBTB33 GTRD no Lung (A549) 108220550
chr16 87833991 87862182 ZBTB33 GTRD no Lung (A549) 108220551
chr16 87833991 87862182 ZBTB33 GTRD no Lung (A549) 108220552
chr16 87833991 87862182 ZBTB33 GTRD no Lung (A549) 108220553
chr16 87833991 87862182 ZBTB33 GTRD no Lung (A549) 108220554
chr16 87835688 87859732 ZBTB33 GTRD no Lung (A549) 108220557
chr16 87835688 87859732 ZBTB33 GTRD no Lung (A549) 108220558
chr16 87835688 87859732 ZBTB33 GTRD no Lung (A549) 108220559
chr16 87835688 87859732 ZBTB33 GTRD no Lung (A549) 108220560
chr16 87835688 87859732 ZBTB33 GTRD no Lung (A549) 108220561
chr16 87835689 87859633 ZBTB33 GTRD no Lung (A549) 108220562
chr16 87835689 87859633 ZBTB33 GTRD no Lung (A549) 108220563
chr16 87835689 87859633 ZBTB33 GTRD no Lung (A549) 108220564
chr16 87835689 87859633 ZBTB33 GTRD no Lung (A549) 108220565
chr16 87835689 87859633 ZBTB33 GTRD no Lung (A549) 108220566
chr16 87835696 87858882 ZBTB33 GTRD no Lung (A549) 108220571
chr16 87835696 87858882 ZBTB33 GTRD no Lung (A549) 108220572
chr16 87835696 87858882 ZBTB33 GTRD no Lung (A549) 108220573
chr16 87835696 87858882 ZBTB33 GTRD no Lung (A549) 108220574
chr16 87835696 87858882 ZBTB33 GTRD no Lung (A549) 108220575
chr16 87845512 87859859 ZBTB33 GTRD no Lung (A549) 108220902
chr16 87846715 87857347 ZBTB33 GTRD no Lung (A549) 108220903
chr16 87846824 87858611 ZBTB33 GTRD no Lung (A549) 108220904
chr16 87846851 87857487 ZBTB33 GTRD no Lung (A549) 108220905
chr16 87846885 87860255 ZNF274 GTRD no Liver (HepG2) 21735104
chr16 87846885 87860255 ZNF274 GTRD no Liver (HepG2) 108220906
chr16 87849389 87859104 ZBTB33 GTRD no Lung (A549) 108220907
chr16 87849392 87858456 ZBTB33 GTRD no Lung (A549) 108220908
chr16 87849449 87856674 ZBTB33 GTRD no Lung (A549) 108220909
chr16 87849744 87857393 ZBTB33 GTRD no Lung (A549) 108220910
chr16 87850953 87857691 TCF7L2 GTRD no Colon (HCT116) 108220911
chr16 87851680 87858011 ZNF274 GTRD no Liver (HepG2) 108220912
chr16 87852629 87857540 ZNF274 GTRD no Cervix (HeLa-S3) 108220913
chr16 87852657 87856521 ZNF274 GTRD no Bone Marrow (K562) 108220914
chr16 87852682 87857512 ZNF274 GTRD no Cervix (HeLa-S3) 108220915
chr16 87852950 87856460 ZNF274 GTRD no Cervix (HeLa-S3) 108220916
chr16 87853030 87854029 P63 GTRD no Skin (Keratinocyte) 21735108
chr16 87853041 87854016 P63 GTRD no Skin (Keratinocyte) 21735109
chr16 87853088 87857009 TCF7L2 GTRD no Colon (HCT116) 108220917
chr16 87853105 87857738 ZNF274 GTRD no Cervix (HeLa-S3) 108220918
chr16 87853177 87854038 P63 GTRD no Skin (Keratinocyte) 21735111
chr16 87853185 87853904 P63 GTRD no Skin (Keratinocyte) 21735112
chr16 87853328 87856635 ZBTB33 GTRD no Lung (A549) 108220919
chr16 87853507 87854072 SOX2 GTRD no Neural Stem Cells (H9) 21735113
chr16 87853557 87854025 SOX2 GTRD no Neural Stem Cells (H9) 21735114
chr16 87853629 87854020 SOX2 GTRD no Neural Stem Cells (H9) 21735115
chr16 87853664 87854016 SOX2 GTRD no Neural Stem Cells (H9) 21735116
chr16 87853689 87854193 SOX2 GTRD no Neural Stem Cells (H9) 21735117
chr16 87853696 87854040 SOX2 GTRD no Neural Stem Cells (H9) 21735118
chr16 87853811 87853830 REST JASPAR yes 12243925
Genes associated with rs6540086[chr16:87853820], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More