EnhancerDB
  1. Home
  2. SNP
  3. rs6540443[chr1:208002010]
Enhancers that have rs6540443[chr1:208002010]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 207976785 208007638 enh901
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs6540443[chr1:208002010]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 208001509 208002059 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374484
chr1 208001646 208002162 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374485
chr1 208001773 208002229 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374486
chr1 208001779 208002195 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374487
chr1 208001797 208002237 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374488
chr1 208001820 208002256 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21374489
chr1 208001828 208002192 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374490
chr1 208001833 208002203 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374491
chr1 208001834 208002230 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21374492
chr1 208001835 208002199 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374493
chr1 208001840 208002260 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21374494
chr1 208001843 208002163 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374495
chr1 208001844 208002194 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21374496
chr1 208001844 208002224 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21374497
chr1 208001859 208002058 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374498
chr1 208001861 208002231 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374499
chr1 208001863 208002167 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374500
chr1 208001866 208002142 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374501
chr1 208001868 208002388 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21374502
chr1 208001873 208002243 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21374503
chr1 208001875 208002311 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21374504
chr1 208001879 208002060 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21374505
chr1 208001896 208002226 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21374506
chr1 208001920 208002090 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374507
chr1 208001922 208002202 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374508
chr1 208001930 208002250 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21374509
chr1 208001946 208002256 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374510
chr1 208001950 208002204 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374511
chr1 208001950 208002240 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374512
chr1 208001952 208002242 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21374513
chr1 208001954 208002244 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21374514
chr1 208001959 208002107 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374515
chr1 208001959 208002229 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374516
chr1 208001975 208002245 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21374517
chr1 208001982 208002212 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21374518
chr1 208001983 208002243 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21374519
chr1 208001987 208002176 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21374520
chr1 208001988 208002181 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21374521
chr1 208002003 208002171 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21374522
chr1 208002010 208002031 ZNF263 JASPAR yes 34879706
Genes associated with rs6540443[chr1:208002010], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More