EnhancerDB
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  3. rs6541045[chr1:12669404]
Enhancers that have rs6541045[chr1:12669404]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12643625 12676355 enh11516
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs6541045[chr1:12669404]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12669396 12669411 TFAP2A JASPAR yes 26838923
chr1 12669398 12669411 TFAP2A JASPAR yes 26838924
chr1 12669398 12669411 TFAP2B JASPAR yes 26838925
chr1 12669398 12669411 TFAP2C JASPAR yes 26838926
chr1 12669398 12669413 TFAP2A JASPAR yes 26838927
chr1 12669398 12669413 TFAP2C JASPAR yes 26838928
Genes associated with rs6541045[chr1:12669404], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More