EnhancerDB
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  3. rs6542532[chr2:120245163]
Enhancers that have rs6542532[chr2:120245163]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 120231916 120251995 enh18838
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Astrocyte Lung (A549) Stomach Placenta Lung (PC-9) Pancreas Muscle (Myotube) Thymus Heart
chr2 120244633 120249040 vista930
VISTA
Transcript factors that have rs6542532[chr2:120245163]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 120245154 120245168 EBF1 JASPAR yes 68279484
chr2 120245154 120245168 EBF1 JASPAR yes 76489297
chr2 120245155 120245166 EBF1 JASPAR yes 68279485
chr2 120245155 120245166 EBF1 JASPAR yes 76489298
chr2 120245155 120245169 EBF1 JASPAR yes 68279486
chr2 120245155 120245169 EBF1 JASPAR yes 76489299
chr2 120245157 120245168 EBF1 JASPAR yes 68279487
chr2 120245157 120245168 EBF1 JASPAR yes 76489300
chr2 120245161 120245166 TFAP2A TRANSFAC yes 68279488
chr2 120245161 120245166 TFAP2A TRANSFAC yes 76489301
chr2 120245161 120245167 MZF1 JASPAR yes 68279489
chr2 120245161 120245167 MZF1 JASPAR yes 76489302
Genes associated with rs6542532[chr2:120245163], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More