EnhancerDB
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  3. rs654897[chr1:201530119]
Enhancers that have rs654897[chr1:201530119]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201518985 201542475 enh27421
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Heart
Transcript factors that have rs654897[chr1:201530119]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201530118 201530131 SCRT2 JASPAR yes 34507002
chr1 201530118 201530133 SCRT1 JASPAR yes 34507003
Genes associated with rs654897[chr1:201530119], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 201857808 201861434 + SHISA4 ENSG00000198892.6 201857808 327689 Uterus 0.472982 1712