EnhancerDB
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  3. rs6556454[chr5:159250393]
Enhancers that have rs6556454[chr5:159250393]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 159249649 159256095 enh38575
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Astrocyte Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Uterus Stomach
Transcript factors that have rs6556454[chr5:159250393]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 159250393 159250397 H1TF2 TRANSFAC yes 67319187
chr5 159250393 159250397 NFE TRANSFAC yes 67319188
chr5 159250393 159250397 SRF TRANSFAC yes 67319189
Genes associated with rs6556454[chr5:159250393], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More