EnhancerDB
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  3. rs6565530[chr17:79021301]
Enhancers that have rs6565530[chr17:79021301]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79008825 79027145 enh17433
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs6565530[chr17:79021301]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79021296 79021303 USF1 JASPAR yes 56300923
chr17 79021297 79021302 MYC TRANSFAC yes 56300924
chr17 79021297 79021302 USF1 TRANSFAC yes 56300925
chr17 79021297 79021302 USF2 TRANSFAC yes 56300926
Genes associated with rs6565530[chr17:79021301], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More