Enhancers that have rs6580720[chr12:50092308]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50089605 50099801 enh2335
chr12 50092156 50092464 vista13355

Transcript factors that have rs6580720[chr12:50092308]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50092088 50092758 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108030745
chr12 50092088 50092758 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108030746
chr12 50092151 50092521 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030747
chr12 50092178 50092357 ZNF274 GTRD no Liver (HepG2) 108030748
chr12 50092297 50092317 RREB1 JASPAR yes 82401012
chr12 50092297 50092317 RREB1 JASPAR yes 120793116
chr12 50092298 50092318 RREB1 JASPAR yes 82401013
chr12 50092298 50092318 RREB1 JASPAR yes 120793117
chr12 50092299 50092309 ZNF740 JASPAR yes 82401014
chr12 50092299 50092309 ZNF740 JASPAR yes 120793118
chr12 50092299 50092319 RREB1 JASPAR yes 82401015
chr12 50092299 50092319 RREB1 JASPAR yes 120793119
chr12 50092300 50092312 INSM1 JASPAR yes 82401016
chr12 50092300 50092312 INSM1 JASPAR yes 120793120
chr12 50092301 50092321 RREB1 JASPAR yes 82401017
chr12 50092301 50092321 RREB1 JASPAR yes 120793121
chr12 50092302 50092322 RREB1 JASPAR yes 82401018
chr12 50092302 50092322 RREB1 JASPAR yes 120793122
chr12 50092303 50092323 RREB1 JASPAR yes 82401019
chr12 50092303 50092323 RREB1 JASPAR yes 120793123
chr12 50092305 50092320 FOXP1 JASPAR yes 82401020
chr12 50092305 50092320 FOXP1 JASPAR yes 120793124
chr12 50092307 50092322 FOXP1 JASPAR yes 82401021
chr12 50092307 50092322 FOXP1 JASPAR yes 120793125

Genes associated with rs6580720[chr12:50092308], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More