EnhancerDB
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  3. rs6588482[chr1:54054618]
Enhancers that have rs6588482[chr1:54054618]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54045925 54059092 enh26707
Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Astrocyte Peripheral Blood (MM.1S) Pancreas Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs6588482[chr1:54054618]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54051058 54055279 ZNF274 GTRD no Bone Marrow (K562) 107804010
chr1 54051288 54055240 ZNF274 GTRD no Bone Marrow (K562) 107804011
chr1 54051504 54055886 ZNF274 GTRD no Bone Marrow (K562) 107804012
chr1 54051524 54054710 ZNF274 GTRD no Blood (GM12878) 107804013
chr1 54051609 54054952 ZNF274 GTRD no Liver (HepG2) 107804014
chr1 54051654 54054972 ZNF274 GTRD no Bone Marrow (K562) 107804015
chr1 54051686 54055847 ZNF274 GTRD no Bone Marrow (K562) 107804016
chr1 54051701 54055017 ZNF274 GTRD no Blood (GM12878) 107804018
chr1 54051769 54054829 ZNF274 GTRD no Cervix (HeLa-S3) 107804024
chr1 54051794 54054885 ZNF274 GTRD no Blood (GM12878) 107804027
chr1 54051813 54054906 ZNF274 GTRD no Blood (GM12878) 107804028
chr1 54051818 54054947 ZNF274 GTRD no Bone Marrow (K562) 107804029
chr1 54051842 54054813 ZNF274 GTRD no Liver (HepG2) 107804031
chr1 54051867 54054743 ZNF274 GTRD no Bone Marrow (K562) 107804033
chr1 54051873 54054699 ZNF274 GTRD no Bone Marrow (K562) 107804035
chr1 54051877 54054827 ZNF143 GTRD no Epithelial (MCF-7) 107804036
chr1 54051884 54054752 ZNF274 GTRD no Bone Marrow (K562) 107804037
chr1 54051886 54054822 ZNF274 GTRD no Bone Marrow (K562) 107804038
chr1 54051900 54054836 ZNF274 GTRD no Bone Marrow (K562) 107804039
chr1 54051901 54055117 ZNF274 GTRD no Bone Marrow (K562) 107804040
chr1 54051930 54054973 ZNF274 GTRD no Bone Marrow (K562) 107804043
chr1 54051946 54054856 ZNF274 GTRD no Bone Marrow (K562) 107804044
chr1 54051977 54054869 ZNF274 GTRD no Bone Marrow (K562) 107804046
chr1 54052024 54054978 STAT3 GTRD no Blood (OCI-LY7) 107804049
chr1 54052073 54054649 ZNF274 GTRD no Blood (GM12878) 107804053
chr1 54052073 54054680 ZNF143 GTRD no Epithelial (MCF-7) 107804054
chr1 54052210 54055120 ZNF274 GTRD no Bone Marrow (K562) 107804070
chr1 54052253 54054978 ZNF274 GTRD no Bone Marrow (K562) 107804082
chr1 54052254 54054731 ZBTB33 GTRD no Brain (SK-N-SH) 107804083
chr1 54052265 54054641 ZBTB33 GTRD no Brain (SK-N-SH) 107804086
chr1 54052279 54054759 ZNF274 GTRD no Bone Marrow (K562) 107804089
chr1 54052286 54054926 ZNF274 GTRD no Bone Marrow (K562) 107804090
chr1 54052318 54055023 ZNF274 GTRD no Bone Marrow (K562) 107804095
chr1 54052497 54054663 ZNF274 GTRD no Blood (GM12878) 107804122
chr1 54052662 54054715 ZNF274 GTRD no Bone Marrow (K562) 107804154
chr1 54052785 54054936 ZNF274 GTRD no Blood (GM12878) 107804169
chr1 54052891 54054956 ZNF274 GTRD no Bone Marrow (K562) 107804183
chr1 54052977 54054831 ZNF274 GTRD no Bone Marrow (K562) 107804195
chr1 54052979 54054829 ZNF274 GTRD no Bone Marrow (K562) 107804196
Genes associated with rs6588482[chr1:54054618], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More