EnhancerDB
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  3. rs6598247[chr15:99976336]
Enhancers that have rs6598247[chr15:99976336]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 99971645 99998102 enh16467
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs6598247[chr15:99976336]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 99975585 99976526 ZNF143 GTRD no Epithelial (MCF-7) 21682012
chr15 99975585 99976526 ZNF143 GTRD no Epithelial (MCF-7) 108168405
chr15 99975782 99976497 TCF7L2 GTRD no Colon (HCT116) 21682014
chr15 99975831 99976651 ZNF143 GTRD no Epithelial (MCF-7) 21682015
chr15 99975873 99976459 TCF7L2 GTRD no Colon (HCT116) 21682016
chr15 99975888 99976667 ZNF143 GTRD no Epithelial (MCF-7) 21682017
chr15 99975889 99976664 ZNF143 GTRD no Epithelial (MCF-7) 21682019
chr15 99975936 99976468 ZNF143 GTRD no Epithelial (MCF-7) 21682021
chr15 99975976 99976640 ZNF143 GTRD no Epithelial (MCF-7) 21682022
chr15 99975986 99976482 TCF7L2 GTRD no Colon (HCT116) 21682023
chr15 99976031 99976539 ZNF143 GTRD no Epithelial (MCF-7) 21682025
chr15 99976322 99976337 ESR2 JASPAR yes 25873042
chr15 99976322 99976342 ESR1 JASPAR yes 25873043
chr15 99976326 99976341 JUND JASPAR yes 25873044
chr15 99976328 99976342 ATF7 JASPAR yes 25873045
chr15 99976328 99976342 BATF3 JASPAR yes 25873046
chr15 99976329 99976341 JDP2 JASPAR yes 25873047
chr15 99976329 99976344 JUND JASPAR yes 25873048
chr15 99976330 99976343 JUN JASPAR yes 25873049
chr15 99976331 99976338 JUN TRANSFAC yes 25873050
chr15 99976335 99976345 SREBF1 JASPAR yes 25873051
chr15 99976335 99976345 SREBF2 JASPAR yes 25873052
Genes associated with rs6598247[chr15:99976336], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More