EnhancerDB
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  3. rs6600298[chr1:40288417]
Enhancers that have rs6600298[chr1:40288417]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40278465 40303035 enh11766
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs6600298[chr1:40288417]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40288410 40288420 MZF1 JASPAR yes 28293522
chr1 40288415 40288424 SRY JASPAR yes 28293523
chr1 40288417 40288420 MYB TRANSFAC yes 28293524
chr1 40288417 40288436 RFX2 JASPAR yes 28293525
Genes associated with rs6600298[chr1:40288417], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More