EnhancerDB
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  3. rs6600301[chr1:40294186]
Enhancers that have rs6600301[chr1:40294186]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40278465 40303035 enh11766
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs6600301[chr1:40294186]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40294168 40294188 RREB1 JASPAR yes 28294409
chr1 40294173 40294193 RREB1 JASPAR yes 28294410
chr1 40294184 40294187 MYB TRANSFAC yes 28294414
chr1 40294185 40294201 SOX8 JASPAR yes 28294415
Genes associated with rs6600301[chr1:40294186], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More