EnhancerDB
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  3. rs6603054[chr16:88368427]
Enhancers that have rs6603054[chr16:88368427]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88359920 88374013 enh32028
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs6603054[chr16:88368427]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88367936 88368440 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736124
chr16 88368102 88368824 TCF7L2 GTRD no Colon (HCT116) 21736129
chr16 88368417 88368431 MTF1 JASPAR yes 12279982
chr16 88368426 88368431 ETS2 TRANSFAC yes 12279983
Genes associated with rs6603054[chr16:88368427], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More