EnhancerDB
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  3. rs6603057[chr16:88338983]
Enhancers that have rs6603057[chr16:88338983]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88327201 88357367 enh16902
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus
Transcript factors that have rs6603057[chr16:88338983]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88337968 88339260 ZNF274 GTRD no Bone Marrow (K562) 108221904
chr16 88337968 88339260 ZNF274 GTRD no Bone Marrow (K562) 108221905
chr16 88337983 88340927 ZNF143 GTRD no Epithelial (MCF-7) 108221908
chr16 88337983 88340927 ZNF143 GTRD no Epithelial (MCF-7) 108221909
chr16 88337983 88340927 ZNF143 GTRD no Epithelial (MCF-7) 108221910
chr16 88338004 88339360 ZNF143 GTRD no Epithelial (MCF-7) 108221912
chr16 88338060 88339254 ZNF274 GTRD no Bone Marrow (K562) 108221919
chr16 88338087 88339509 TCF7L2 GTRD no Colon (HCT116) 108221921
chr16 88338138 88343321 ZNF143 GTRD no Epithelial (MCF-7) 108221932
chr16 88338138 88343321 ZNF143 GTRD no Epithelial (MCF-7) 108221933
chr16 88338967 88338987 TP63 JASPAR yes 12276197
chr16 88338969 88338984 TP53 JASPAR yes 12276198
Genes associated with rs6603057[chr16:88338983], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More