EnhancerDB
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  3. rs6656342[chr1:43932739]
Enhancers that have rs6656342[chr1:43932739]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43924725 43950195 enh11811
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Stomach
Transcript factors that have rs6656342[chr1:43932739]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43932738 43932749 TBX20 JASPAR yes 28497010
chr1 43932738 43932756 RARA JASPAR yes 28497011
chr1 43932739 43932747 TBX15 JASPAR yes 28497012
chr1 43932739 43932750 E2F6 JASPAR yes 28497013
Genes associated with rs6656342[chr1:43932739], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More