EnhancerDB
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  3. rs6656470[chr1:202017400]
Enhancers that have rs6656470[chr1:202017400]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs6656470[chr1:202017400]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202008954 202021472 ZBTB33 GTRD no Lung (A549) 107857529
chr1 202009111 202020493 ZBTB33 GTRD no Lung (A549) 107857530
chr1 202014763 202020119 ZBTB33 GTRD no Lung (A549) 107857531
chr1 202014791 202021226 ZBTB33 GTRD no Lung (A549) 107857532
chr1 202014792 202019513 ZBTB33 GTRD no Lung (A549) 107857533
chr1 202014810 202019522 ZBTB33 GTRD no Lung (A549) 107857534
chr1 202014811 202019498 ZBTB33 GTRD no Lung (A549) 107857535
chr1 202014820 202019524 ZBTB33 GTRD no Lung (A549) 107857536
chr1 202014841 202019498 ZBTB33 GTRD no Lung (A549) 107857538
chr1 202014863 202020026 ZBTB33 GTRD no Lung (A549) 107857539
chr1 202015152 202019509 ZBTB33 GTRD no Lung (A549) 107857540
chr1 202015381 202019529 ZBTB33 GTRD no Lung (A549) 107857541
chr1 202015415 202019526 ZBTB33 GTRD no Lung (A549) 107857542
chr1 202015533 202019697 ZBTB33 GTRD no Lung (A549) 107857543
chr1 202015945 202019617 ZNF274 GTRD no Bone Marrow (K562) 107857556
chr1 202016246 202019550 ZBTB33 GTRD no Lung (A549) 107857587
chr1 202016939 202020131 ZNF143 GTRD no Epithelial (MCF-7) 21365823
chr1 202016998 202019835 ZNF143 GTRD no Epithelial (MCF-7) 21365824
chr1 202017009 202020324 ZNF143 GTRD no Epithelial (MCF-7) 21365825
chr1 202017017 202024420 ZNF143 GTRD no Epithelial (MCF-7) 21365826
chr1 202017017 202024420 ZNF143 GTRD no Epithelial (MCF-7) 21365827
chr1 202017089 202019649 ZNF143 GTRD no Epithelial (MCF-7) 21365828
chr1 202017146 202019621 ZNF143 GTRD no Epithelial (MCF-7) 21365829
chr1 202017151 202020275 ZNF143 GTRD no Epithelial (MCF-7) 21365830
chr1 202017157 202019958 ZNF143 GTRD no Epithelial (MCF-7) 21365831
chr1 202017163 202019592 ZNF143 GTRD no Epithelial (MCF-7) 21365832
chr1 202017169 202020675 ZNF143 GTRD no Epithelial (MCF-7) 21365833
chr1 202017190 202019670 ZNF143 GTRD no Epithelial (MCF-7) 21365834
chr1 202017198 202019882 ZNF143 GTRD no Epithelial (MCF-7) 21365835
chr1 202017242 202019887 ZNF143 GTRD no Epithelial (MCF-7) 21365836
chr1 202017245 202019658 ZNF143 GTRD no Epithelial (MCF-7) 21365837
chr1 202017246 202017430 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21365838
chr1 202017246 202019813 ZNF143 GTRD no Epithelial (MCF-7) 21365839
chr1 202017249 202019927 ZNF143 GTRD no Epithelial (MCF-7) 21365840
chr1 202017259 202019520 ZNF143 GTRD no Epithelial (MCF-7) 21365841
chr1 202017265 202019527 ZNF143 GTRD no Epithelial (MCF-7) 21365842
chr1 202017270 202020252 ZNF143 GTRD no Epithelial (MCF-7) 21365843
chr1 202017276 202019869 ZNF143 GTRD no Epithelial (MCF-7) 21365844
chr1 202017287 202019477 TCF7L2 GTRD no Colon (HCT116) 21365845
chr1 202017301 202019420 ZNF143 GTRD no Epithelial (MCF-7) 21365846
chr1 202017319 202019511 ZNF143 GTRD no Epithelial (MCF-7) 21365847
chr1 202017342 202019508 ZNF143 GTRD no Epithelial (MCF-7) 21365848
chr1 202017393 202017405 MEF2A JASPAR yes 34546459
chr1 202017393 202017405 MEF2D JASPAR yes 34546460
chr1 202017395 202017404 SOX9 JASPAR yes 34546462
chr1 202017400 202017414 GATA2 JASPAR yes 34546463
Genes associated with rs6656470[chr1:202017400], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More