EnhancerDB
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  3. rs6656998[chr1:220511784]
Enhancers that have rs6656998[chr1:220511784]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220507105 220520135 enh12680
Skin (Keratinocyte) Prostate (RWPE1) Esophagus Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs6656998[chr1:220511784]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220510904 220511798 P63 GTRD no Skin (Keratinocyte) 21381649
chr1 220510904 220511798 P63 GTRD no Skin (Keratinocyte) 107871018
chr1 220511048 220511795 ZNF143 GTRD no Epithelial (MCF-7) 21381650
chr1 220511048 220512567 ZNF274 GTRD no Cervix (HeLa-S3) 107871020
chr1 220511471 220512579 ZNF274 GTRD no Bone Marrow (K562) 107871021
chr1 220511508 220512535 ZNF274 GTRD no Cervix (HeLa-S3) 107871022
chr1 220511552 220512427 ZBTB33 GTRD no Lung (A549) 107871023
chr1 220511610 220512725 AR GTRD no Prostate (PC-3) 107871024
chr1 220511661 220512363 ZNF143 GTRD no Epithelial (MCF-7) 21381655
chr1 220511661 220512363 ZNF143 GTRD no Epithelial (MCF-7) 107871025
chr1 220511689 220512307 ZNF274 GTRD no Cervix (HeLa-S3) 107871026
chr1 220511702 220512211 ZNF143 GTRD no Epithelial (MCF-7) 21381656
chr1 220511703 220512387 ZNF143 GTRD no Epithelial (MCF-7) 21381657
chr1 220511703 220512387 ZNF143 GTRD no Epithelial (MCF-7) 107871027
chr1 220511706 220512289 ZNF274 GTRD no Bone Marrow (K562) 107871028
chr1 220511716 220512364 ZNF274 GTRD no Cervix (HeLa-S3) 107871029
chr1 220511767 220511786 PAX5 JASPAR yes 35485646
chr1 220511779 220512268 ZNF143 GTRD no Epithelial (MCF-7) 21381658
Genes associated with rs6656998[chr1:220511784], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More