EnhancerDB
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  3. rs6658539[chr1:9610722]
Enhancers that have rs6658539[chr1:9610722]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9595905 9627275 enh49
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6658539[chr1:9610722]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9610705 9610726 IRF1 JASPAR yes 26660724
chr1 9610707 9610722 PRDM1 JASPAR yes 26660725
chr1 9610710 9610725 MEF2A JASPAR yes 26660728
chr1 9610711 9610726 MEF2C JASPAR yes 26660729
chr1 9610712 9610724 FOXC2 JASPAR yes 26660730
chr1 9610712 9610724 MEF2A JASPAR yes 26660731
chr1 9610712 9610724 MEF2B JASPAR yes 26660732
chr1 9610712 9610724 MEF2D JASPAR yes 26660733
chr1 9610713 9610723 MEF2A JASPAR yes 26660734
chr1 9610716 9610726 HOXD13 JASPAR yes 26660736
chr1 9610716 9610727 HOXA10 JASPAR yes 26660737
chr1 9610717 9610732 HNF1A JASPAR yes 26660738
chr1 9610718 9610731 HNF1B JASPAR yes 26660739
chr1 9610718 9610732 POU4F1 JASPAR yes 26660740
chr1 9610718 9610734 POU4F2 JASPAR yes 26660741
chr1 9610718 9610734 POU4F3 JASPAR yes 26660742
chr1 9610719 9610729 PAX3 JASPAR yes 26660743
chr1 9610719 9610729 PAX7 JASPAR yes 26660744
chr1 9610720 9610734 POU4F1 JASPAR yes 26660745
chr1 9610720 9610735 HNF1A JASPAR yes 26660746
chr1 9610721 9610731 GSX1 JASPAR yes 26660747
chr1 9610721 9610731 GSX2 JASPAR yes 26660748
chr1 9610721 9610731 LHX2 JASPAR yes 26660749
chr1 9610721 9610731 LHX6 JASPAR yes 26660750
chr1 9610721 9610731 MNX1 JASPAR yes 26660751
chr1 9610721 9610731 NOTO JASPAR yes 26660752
chr1 9610721 9610731 POU6F1 JASPAR yes 26660753
chr1 9610721 9610731 RAX JASPAR yes 26660754
chr1 9610721 9610736 HNF1A JASPAR yes 26660755
chr1 9610722 9610730 ISX JASPAR yes 26660756
chr1 9610722 9610730 LMX1A JASPAR yes 26660757
chr1 9610722 9610730 LMX1B JASPAR yes 26660758
chr1 9610722 9610730 NKX6-1 JASPAR yes 26660759
chr1 9610722 9610730 NKX6-2 JASPAR yes 26660760
chr1 9610722 9610730 PRRX1 JASPAR yes 26660761
chr1 9610722 9610730 RAX2 JASPAR yes 26660762
chr1 9610722 9610730 SHOX JASPAR yes 26660763
chr1 9610722 9610730 UNCX JASPAR yes 26660764
chr1 9610722 9610730 VAX1 JASPAR yes 26660765
chr1 9610722 9610733 PHOX2A JASPAR yes 26660766
chr1 9610722 9610733 PROP1 JASPAR yes 26660767
chr1 9610722 9610736 POU4F1 JASPAR yes 26660768
chr1 9610722 9610738 POU4F2 JASPAR yes 26660769
chr1 9610722 9610738 POU4F3 JASPAR yes 26660770
Genes associated with rs6658539[chr1:9610722], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More