EnhancerDB
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  3. rs6659540[chr1:15482697]
Enhancers that have rs6659540[chr1:15482697]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15476925 15489875 enh11530
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs6659540[chr1:15482697]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15482687 15482699 NHLH1 JASPAR yes 26964652
Genes associated with rs6659540[chr1:15482697], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More