EnhancerDB
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  3. rs6660261[chr1:33418200]
Enhancers that have rs6660261[chr1:33418200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33412495 33428675 enh215
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Uterus
Transcript factors that have rs6660261[chr1:33418200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33418194 33418213 REST JASPAR yes 28016523
chr1 33418196 33418205 HIC2 JASPAR yes 28016524
chr1 33418198 33418208 SP1 JASPAR yes 28016525
chr1 33418199 33418203 LFA1 TRANSFAC yes 28016526
Genes associated with rs6660261[chr1:33418200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 33327869 33338083 - FNDC5 ENSG00000160097.11 33338083 80117 Ovary 0.445481 468