EnhancerDB
  1. Home
  2. SNP
  3. rs6660490[chr1:211517928]
Enhancers that have rs6660490[chr1:211517928]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 211498150 211519175 enh904
Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Muscle (Myotube) Thymus Epithelial (MCF-7)
chr1 211517513 211517976 vista4959
VISTA
Transcript factors that have rs6660490[chr1:211517928]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 211513300 211518875 ZNF274 GTRD no Cervix (HeLa-S3) 21375813
chr1 211513300 211518875 ZNF274 GTRD no Cervix (HeLa-S3) 107867208
chr1 211517518 211518068 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867227
chr1 211517570 211518026 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867228
chr1 211517636 211519419 ZNF274 GTRD no Blood (GM12878) 21375823
chr1 211517636 211519419 ZNF274 GTRD no Blood (GM12878) 107867230
chr1 211517651 211517975 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867231
chr1 211517660 211517940 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867232
chr1 211517777 211519732 ZNF274 GTRD no Blood (GM12878) 21375824
chr1 211517777 211519732 ZNF274 GTRD no Blood (GM12878) 107867236
chr1 211517828 211519372 ZNF274 GTRD no Blood (GM12878) 21375825
chr1 211517828 211519372 ZNF274 GTRD no Blood (GM12878) 107867237
chr1 211517859 211522046 ZNF274 GTRD no Liver (HepG2) 107867238
chr1 211517926 211517941 NR2C2 JASPAR yes 35055129
chr1 211517926 211517941 NR2C2 JASPAR yes 118451150
Genes associated with rs6660490[chr1:211517928], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More